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Biology

87 cards·by ktank
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Photoautotrophs
Convert light energy into chemical energy and carbon dioxide to organic molecules
Mesophyll
Plant leaf tissue where majority of photosynthesis takes place
Chloroplast
Two membranes; Thylakoid membrane contains majority of photosynthetic protein complexes
Light reactions
Light energy captured by pigments; Electron transport chain producing a proton gradient across the membrane
Products of light reactions of photosynthesis
ATP; NADPH; O2
Stages of photosynthesis
Light reactions; Calvin Cycle
Pigments
chlorophyll - major pigment
Photosystems
Large membrane protein complexes used to absorb the light energy
Photosystem 2
splits water molecule to replace electron lost due to light exciting a special pair of chlorophylls
Photosystem 1
uses electron originating from Photosystem II to replace electron lost due to light exciting a special pair of chlorophylls
Calvin Cycle
Atmospheric carbon dioxide, ATP, and NADPH used to produce organic molecules
Glyceraldehyde 3-phosphate (G3P)
product of Calvin Cycle; 3-carbon molecule; used to make glucose, the disaccharide sucrose, and other organic molecules as needed
DNA
Double stranded, Deoxyribose sugar, adenine (A) cytosine (C) thymine (T) guanine (G)
RNA
Single stranded, Ribose sugar, adenine (A) cytosine (C) uracil (U) guanine (G)
Nucleotide
monomer used to make DNA and RNA
3 things that make a nucleotide
1. Phosphate group 2. Sugar molecule 3. Nitrogenous base
DNA/RNA
Sugar-phosphate backbone; Base perpendicular to backbone
Structure of DNA
Strands held together by hydrogen bonding between bases; helical; directional - 5’ to 3’
Who determined the structure of DNA
Rosalind Franklin with James Watson and Francis Crick
DNA replication: Semiconservative
each new strand bonded to an existing strand; Begins at origins of replication
DNA replication: DNA polymerase
replication enzyme
Replication on 3’ to 5’ template is
continuous
Replication on 5’ to 3’ template occurs in
fragments (Okazaki fragments)
DNA replication: DNA ligase
seals breaks between Okazaki fragments
Central Dogma of Biology
DNA ---> RNA ---> Protein
Transcription
DNA ---> RNA
Translation
RNA ---> Protein
Genes
DNA sequence typically used to produce a protein product Gene sequence read 3-bases at a time (triplet code) aka codon
Possible number of codons from the four bases (4^3)
64
codons translate to a particular amino acid
61; 3 codons are known as “Stop codons” terminating transcription and translation
Genetic code is
redundant, unambiguous, and nearly universal
Genetic code: redundant
more than one codon for some amino acids
Genetic code: unambiguous
any codon for one amino acid does not code for any other amino acid
Genetic code: nearly universal
the genetic code is shared by organisms from the simplest bacteria to the most complex plants and animals
Steps of Transcription
initiation, elongation, and termination
Transcription initiation
the attachment of RNA polymerase to the promoter and the start of RNA synthesis
Transcription elongation
the newly formed RNA strand grows
Transcription termination
when RNA polymerase reaches the terminator DNA and the polymerase molecule detaches from the newly made RNA strand and the gene
Product of Transcription
messenger RNA (mRNA)
Prokaryotic mRNA
entire strand used to translate into protein
Eukaryotic mRNA
contains regions NOT used to translate into protein: Intron and Exon
Intron
non-coding regions removed before translation
Exon
coding regions
mRNA processing
RNA splicing, mRNA cap, Poly-A tail
RNA splicing
removal of introns and fusing exons together
mRNA cap
added to 5’ end
Poly-A tail
long chain of adenosines added to 3’ end
Components of Translation
transfer RNA (tRNA); Processed mRNA; Ribosome
transfer RNA (tRNA)
physically brings amino acids to ribosome for translation; contains anti-codon (matches codon on mRNA to ensure correct amino acid is added
ribosome
two subunits: large and small ○ composed almost entirely of ribosomal RNA (rRNA)
3 ways to transfer DNA used by bacteria
transformation, transduction, and conjugation
transformation of DNA used by bacteria
the uptake of DNA from the surrounding environment
transduction of DNA used by bacteria
gene transfer by phages
conjugation of DNA used by bacteria
the transfer of DNA from a donor to a recipient bacterial cell
Plasmids
a small, circular DNA molecule separate from the bacterial chromosome; replicates independent of the chromosome; can have multiple copies
Gene regulation
the turning on and off of genes; occurs at multiple levels
Gene expression
the overall process of information flow from genes to proteins
Operon
a cluster of genes with related functions, along with the control sequences
The Lac operon
three adjacent lactose-utilization genes; a promoter sequence; an operator sequence
a promotor sequence
a site where RNA polymerase binds and initiates transcription of all three lactose genes
an operator sequence
where a repressor can bind and block RNA polymerase action
regulatory gene
located outside the operon, continually codes for a repressor protein
in the absence of lactose
the repressor binds to the operator and prevents RNA polymerase action
Lactose inactivates the repressor, so
the operator is unblocked, RNA polymerase can bind to the promoter, and all three genes of the operon are transcribed
Transcription factors
bind directly to DNA and affect whether and how fast a gene is transcribed; Regulate which genes are turned on or off at any given time
Repressors
bind to promoters or silencers to shut off or slow down transcription
Activators
recruit RNA polymerase to a promoter region to enhance transcription
Chromosome structure
Chromatin: DNA and histones Nucleosome: DNA wrapped around the histone core
DNA packing
Supercoiled nucleosomes physically disrupt gene transcription
Histone Modifications
Acetylation (addition of acetyl groups) Methylation (addition of methyl groups)
Alternative RNA splicing
produces different mRNAs from the same transcript and results in the production of more than one polypeptide from the same gene
microRNA (miRNA)
Small (~25 nucleotides); Complementary to mRNA
function of microRNA
Degrade complementary mRNA molecules; Block its translation
cancer
set of diseases in which the control mechanisms that normally limit cellular growth have malfunctioned
Asexual reproduction
produces offspring that are identical to the original cell or organism; inheritance of allgenes from one parent
Sexual reproduction
produces offspring that are similar to the parents but show variations in traits; involvesinheritance of unique sets of genes from 2 parents
Binary Fission
Cell division in single-celled organisms
Mitosis
Division of a eukaryotic cell’s nucleus
Interphase
duplication of cell contents •G1—growth, increase in cytoplasm •S—duplication of chromosomes •G2—growth, preparation for division
Mitotic
division •Mitosis—division of the nucleus •Cytokinesis—division of cytoplasm
Stages of Mitosis
•prophase •prometaphase •metaphase •anaphase •telophase
Homologous chromosomes are matched in
● length ● centromere position ● staining pattern ● receive one from each parent
locus
the position of a gene
Autosomes
In humans: 22 sets of chromosomes that are similar in their genetic makeup and size (homologous)
Sex chromosomes
X and Y, determine sex of organism
Crossing over
Occurs in prophase I exchange of corresponding segments between nonsister chromatids of homologous chromosomes
Nondisjunction
the failure of chromosomes or chromatids to separate normally during meiosis